diff --git a/examples/test4.cpp b/examples/test4.cpp index 84ae6b9..d23391c 100644 --- a/examples/test4.cpp +++ b/examples/test4.cpp @@ -36,7 +36,7 @@ void parseOptions(int argc, char** argv) // SwitchArg btest("B","sB", "exist Test B", false); - SwitchArg atest("A","sA", "exist Test B", false); + SwitchArg atest("A","sA", "exist Test A", false); ValueArg stest("s", "Bs", "string test", true, "homer", "string"); diff --git a/examples/test7.cpp b/examples/test7.cpp index 89e788f..f47b247 100644 --- a/examples/test7.cpp +++ b/examples/test7.cpp @@ -48,11 +48,11 @@ int main(int argc, char** argv) "Scoring Matrix name", false,"BLOSUM50","name string"); cmd.add( scoringMatrixName ); - ValueArg seq1Filename ("f","filename1", + ValueArg seq1Filename ("x","filename1", "Sequence 1 filename (FASTA format)", false,"","filename"); cmd.add( seq1Filename ); - ValueArg seq2Filename ("F","filename2", + ValueArg seq2Filename ("z","filename2", "Sequence 2 filename (FASTA format)", false,"","filename"); cmd.add( seq2Filename ); diff --git a/tests/test38.out b/tests/test38.out index 3f14859..0249fe1 100644 --- a/tests/test38.out +++ b/tests/test38.out @@ -2,8 +2,8 @@ PARSE ERROR: Argument: -n (--name) Couldn't find 'mike' in allowed list. Brief USAGE: - ../examples/test7 [-l ] [-u ] [-b ] [-F - ] [-f ] [-s ] [-d] + ../examples/test7 [-l ] [-u ] [-b ] [-z + ] [-x ] [-s ] [-d] [-g ] [-f ] -n ... [--] [-v] [-h] <1|2|3> ... diff --git a/tests/test39.out b/tests/test39.out index c2e9c56..8ed4443 100644 --- a/tests/test39.out +++ b/tests/test39.out @@ -2,8 +2,8 @@ PARSE ERROR: Argument: (--times) Couldn't find '6' in allowed list. Brief USAGE: - ../examples/test7 [-l ] [-u ] [-b ] [-F - ] [-f ] [-s ] [-d] + ../examples/test7 [-l ] [-u ] [-b ] [-z + ] [-x ] [-s ] [-d] [-g ] [-f ] -n ... [--] [-v] [-h] <1|2|3> ... diff --git a/tests/test43.out b/tests/test43.out index 25ad3f3..a3fcaba 100644 --- a/tests/test43.out +++ b/tests/test43.out @@ -7,7 +7,7 @@ USAGE: Where: -A, --sA - exist Test B + exist Test A -B, --sB exist Test B diff --git a/tests/test46.out b/tests/test46.out index 9ed6756..f371d74 100644 --- a/tests/test46.out +++ b/tests/test46.out @@ -1,8 +1,8 @@ USAGE: - ../examples/test7 [-l ] [-u ] [-b ] [-F - ] [-f ] [-s ] [-d] + ../examples/test7 [-l ] [-u ] [-b ] [-z + ] [-x ] [-s ] [-d] [-g ] [-f ] -n ... [--] [-v] [-h] <1|2|3> ... @@ -19,10 +19,10 @@ Where: -b , --lowerBound (value required) lower percentage bound - -F , --filename2 + -z , --filename2 (value required) Sequence 2 filename (FASTA format) - -f , --filename1 + -x , --filename1 (value required) Sequence 1 filename (FASTA format) -s , --scoringMatrix